The following are the Main Quests featured in Puella Magi Madoka Magica Magia Exedra. They are mostly recaps of stories from across the Puella Magi franchise, but some are fully original stories.
All Main Quests, including Nightmare Modes, are immediately unlocked after completing Stage Witch Standard Mode.
Puella Magi Madoka Magica Magia ExedraPuella Magi Madoka MagicaMagia Record: Puella Magi Madoka Magica Side StoryPuella Magi Oriko MagicaPuella Magi Madoka Magica: Scene 0Puella Magi Madoka Magica: Wraith ArcMagia Record: Puella Magi Madoka Magica Side Story Crescent MemoriaPuella Magi Madoka Magica -Rebellion-Puella Magi Darc Magica: The Legend of "Jeanne d'Arc"Puella Magi Sorana Magica: Our Fates, Our Futures
Momoko joins Yachiyo, Mifuyu and their new apprentice, Sumire, in investigating the "spiritless Magical Girls" of Toyozuru City, while coming to terms with her own wish.
Tsuruno joins Yachiyo's team, and together they visit Sumire in Toyozuru City. Momoko and her new friends Rena and Kaede investigate the disappearance of the idol unit Plume Plenty, and meet an enigmatic Magical Girl named Fuka.
After Sumire mysteriously leaves the Mikazuki Villa, Mel Anna joins soon after. Fuka and Sumire continue looking for a way to save Magical Girls from their cruel fates, while Yachiyo's team decides to investigate and finally find out why the girls take such drastic measures.
In the year 2225, Sorana Nagiboshi, an introvert still living in Old Capital on Earth after the Great Flood, is approached by Lilly Candy, a streamer she is a massive fan of, to help guide her through Earth. After a Witch attacks them both, Sorana learns about Magical Girls and decides to stop feeling worthless.
Notes
↑The Bosses listed here indicates the end boss for each Window, not Witches that are encountered midway. Multiple bosses listed means that the final boss is different across difficulties.
